51cg

People

Professor Cecile Gubry-Rangin

Professor Cecile Gubry-Rangin
Professor Cecile Gubry-Rangin
Professor Cecile Gubry-Rangin

Personal Chair

Accepting PhDs

51cg
Email Address
c.rangin@abdn.ac.uk
Telephone Number
+44 (0)1224 273662
Office Address

School of Biological Sciences,
Cruickshank Building,
51cg,
St Machar Drive,
Aberdeen AB24 3UU
Scotland, United Kingdom

School/Department
School of Biological Sciences




Biography

2016 - 2025 : Royal Society University Research Fellowship in evolutionary microbial ecology, 51cg 

2012 - 2015 : Early-career NERC Fellowship in evolutionary microbial ecology, 51cg

2009 - 2012 : Post-doctoral researcher in microbial ecology, 51cg, JI Prosser and GW Nicol group

2005 - 2008 : PhD student in bacterial population genetics, University of Montpellier (France), under the supervision of G Béna and JC Cleyet-Marel

Memberships and Affiliations

Internal Memberships
  • Member of the School of Biological Sciences Executive Group (2020-present)
  • Organiser of the School of Biological Sciences weekly scientific seminar series (2017-present)
  • Member of the School of Biological Sciences Research committee (2017-present)
  • Member of the 51cg Strategic Plan meeting (2018)
External Memberships

Editorial Board: Microbiome, Environmental microbiome

Commission of trust: Expert member of the French HCERES (High Council for Evaluation of Research and Higher Education) (2017-present)

Grant panel member: NERC, BBSRC, Royal Society Hooke Committee, German DFG Priority Program 

Conference organisation: XVIth archaeal workshop (2019); Member of local organising committee for the 20th European Nitrogen Cycle Conference (2016) and 14th Symposium on Bacterial Genetics and Ecology (2017)

Grant review: NERC, BBSRC, Royal Society, NSF (USA), DFG (Germany), GACR (Czech Republic)

External PhD examiner

Reviewers for several journals, including Nature Communication, Cell, ISME Journal, Environmental Microbiology, Molecular Biology and Evolution, FEMS Microbiology Ecology, PLOS One, Frontiers in Microbiology, Soil Biology and Biochemistry, Microbial Ecology, Archaea

Membership of professional bodies: SGM (Society of General Microbiology), SMBE (Society of Molecular Biology and Evolution), ISME (International Society of Microbial Ecology), Nitrification network

Latest Publications

  • Soil-plastisphere interfacial properties enable decoding microplastics behaviour in the environment

    Sepehrnia, N., Azimzadeh, B., Charlton, L., Barrio-Zhang, H., Hallett, P. D., Gubry-Rangin, C., Tanino, Y., McHale, G., Martínez, C. E.
    Communications Earth & Environment
    Contributions to Journals: Articles
    • [ONLINE] DOI:

  • Evidence of Biological Nitrification Inhibition in barley to support sustainable nitrogen management

    Gubry-Rangin, C.
    Sustainable Microbiology
    Contributions to Journals: Articles
    • [ONLINE] DOI:

  • Structurally diverse biological nitrification inhibitors display distinct modes of inhibition in ammonia-oxidizing bacteria

    Kaur-Bhambra, J., Khatri, P. K., Hama, J., Gubry-Rangin, C., Brandt, K. K.
    FEMS Microbiology Ecology, vol. 102, no. 4, fiag032
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • High-quality genome assembly and linkage map for a rapidly evolving plant species: Silene uniflora is potentially suitable

    Osborne, O. G., Wood, D. P., Dobreva, M. P., Dunning, L. T., Tucker, R., Coates, S. E. R., Pellicer, J., Holmberg, J., Algar, A. C., Bocedi, G., Gubry-Rangin, C., Herrera Alsina, L., Juliandi, B., Lancaster, L., Touzet, P., Travis, J., Papadopulos, A.
    G3: Genes, Genomes, Genetics Mission, vol. 16, no. 3, jkag002
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Assessing the impact of nature-based solutions on soil health in sub-Saharan Africa through farmer-centred methods

    Bittner, D., Smith, J., Leontidis, G., Campbell, G. A., Biegel, J., Smith, P., Kuhnert, M., Skalský, R., Giuliani, L. M., Salik, A. W., Hallett, P., Burslem, D. F. R. P., Yakob, G., Mekuria, W., Phimister, E., Haileslassie, A., Tegegne, D., Norouzi, S., Chen, H., Gubry-Rangin, C., Khan, A.
    Environmental Research Letters, vol. 21, no. 4, 043004
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

View My Publications

Research

Research Overview

My research is directed toward understanding ecological adaptation of microorganism populations.

My work interest is orientated on microbial diversity and ecological function for microbes playing fundamental processes in the global biogeochemical cycling of nitrogen. I am currently more focused on microorganisms (both archaea and bacteria) implicated in the ammonia oxidation process.

My fundamental aims are to determine the environmental factors controlling their community structure and diversity and to understand their physiological and evolutionary adaptation.

Research Areas

Accepting PhDs

I am currently accepting PhDs in Biological and Environmental Sciences.

Please get in touch if you would like to discuss your research ideas further.

Biological and Environmental Sciences

  • Supervising
  • Accepting PhDs
View Research Area

Current Research

More details about projects and people on my personal website:  

Supervision

My current supervision areas are: Biological and Environmental Sciences.

Supervisees

  • MISS RACHEL CALLAGHAN
  • MISS MAEVA MOUNIER
  • MR SAMUEL DIAZ VASQUEZ
  • MR JACK HENDERSON
  • ELLEN SMITH
  • MISS CLAIRE MCNAMEE
  • MISS ANNIE SHARON
  • MISS SOFIA PALACIO
  • ELLA SCOTT

Funding and Grants

Grants and fellowships (total funding to date: > £8M)

  • NovoNordisk Foundation grant (£16M total; £1,400,000 for UoA) (UK PI) (PI: Victor Kommerell) (2025) ‘CropSustaiN BNI Wheat Mission’
  • Plant CDT studentship (£90,000) (PI) (coI: Paul Hallett) (2025) ‘Contribution of biological nitrification inhibition to soil restoration’
  • Quartiles studentship (£95,000) (PI) (coI: Lesley Lancaster, Chris Allen) (2025) ‘Importance of microbial thermal tolerance in the context of climate change’
  • NERC-NSFGEO (£1M total; £526,000 for UoA) (coI) (PI: Paul Hallett) (2024) ‘Unraveling the formation and impact of the plastisphere in response to environmental stresses in microplastic contaminated soils’
  • DEFRA (£1.2M total, £500,000 for UoA) (coI) (PI: Jo Smith) (2024) ‘CrossRoads: Cataloguing and Rating of Opportunities for Side-lined Species in Restoration of Agriculturally Degraded Soils in Sub-Saharan Africa’
  • BBSRC Research grant (£1,800,000) (coI) (PI: Gareth Norton) (2024) ‘A Multi-level Exploration Of Biological Nitrification Inhibition In Rice For Improved Sustainability Of Crop Production’
  • BBSRC 22ALERT (£810,000) (coI) (PI: Marcel Jaspars) (2023) ‘Analysis Of Biological Small Molecule Mixtures Using Multiple Modes Of Mass Spectrometric Fragmentation Coupled With New Bioinformatics Workflows’
  • Royal Society URF enhanced grant (£200,000) (PI) (2023) ‘Role Of Dormancy In Microbial Biodiversity’
  • BBSRC International grant (UoA) (£33,750) (coI) (PI: Justin Travis) (2022) ‘Resilience of plant-pollinator-microbiome networks to environmental change: implications for food and biodiversity security’
  • Plant CDT studentship (£88,472) (PI) (coI: Michael Wilkinson, Tim George) (2022) ‘Mechanistic understanding of plant-microbe interaction to solve the nitrogen use efficiency dilemma’
  • Plant CDT studentship (£88,472) (coI) (PI: Gareth Norton) (2022) ‘Maximising biological nitrification inhibition capacity of rice’
  • SUPER DTP studentship (£88,472) (PI) (coI: Ashish Malik, Rebekka Artz, Peter Gilbert) (2022) ‘Impact of multiple climate stressors on microbial processes and carbon sequestration in peatlands’
  • BBSRC International grant (UoA) (£47,046) (PI) (coI: Mohea Couturier, Eveline Peeters) (2022) ‘Solving the thaumarchaeotal cultivation puzzle via antibodies-based sorting’
  • UKRI-GCRF Mitigation grant (UoA) (£23,434) (coI) (PI: Justin Travis) (2022) ‘Sharing knowledge and techniques with Indonesian researchers to enhance biodiversity security and ecosystem resilience for rural livelihoods’
  • NERC Quadrat DTP studentship (£88,472) (coI) (PI: Julianne Megaw) (2022) ‘Profiling the global responses of archaea to diverse environmental influences’
  • NovoNordisk Foundation grant (£5.3M total; £1,537,686 for UoA) (UK PI) (PI: Kristian Brandt) (2022) ‘Biological Nitrification Inhibition (BioNI): a novel high-throughput platform integrating wheat genetics, natural product chemistry and microbial ecology approaches to improve sustainable crop production’
  • BBSRC EastBio DTP studentship (£88,472) (PI) (coI: Tim George, Marcel Jaspars) (2022) ‘Crop production sustainability through the microbial lens’
  • NERC SUPER DTP studentship (NE/S007342/1) (£88,472) (PI) (coI: Theodore Henry) (2022) ‘The impact of environmental change on the ecological and evolutionary dynamics of symbiotic sponge communities’
  • ASU Environmental Transition (Sorbonne University Alliance) Studentship (£90,000) (coI) (PI: Jean-Christophe Lata) (2022) ‘Mechanisms underlying the biological inhibition of nitrification by grasses: a controlled environment approach’
  • Royal Society Talent grant (RF/ERE/210076) (£170,000) (PI) (2021) ‘Physiological and evolutionary mechanisms of microbial transitional states’
  • Royal Society University Research Fellowship renewal (URF/R/211039) (£351,000) (PI) (2021) ‘Evolutionary processes associated to archaeal environmental adaptation’
  • Royal Society Enhancement grant (RGF\EA\201049) (£95,000) (PI) (2020) ‘Evolutionary origin of ammonia oxidation’
  • Royal Society Enhancement grant (RGF\EA\180253) (£108,742) (PI) (2017) ‘Experimental evolution of Thaumarchaeota’
  • 51cg / Elphinstone fund Postgraduate Scholarship (£126,840) (PI) (2017) ‘Solving the paradigm of acidic Thaumarchaeota’
  • Royal Society Research Grant (RG160625) (£151, 219) (PI) (2017) ‘Unravelling the metabolic versatility and diversity of abundant but unexplored terrestrial Thaumarchaeota’
  • NERC Directed grant (NE/S006923/1) (£509,113) (Co-I) (PI: Justin Travis) (2018) ‘Forecasting biodiversity losses in Wallacea from ecological and evolutionary patterns and processes’
  • NERC standard grant (NE/R001529/1) (£649,774) (PI) (coI: Tom William) (2017) ‘Evolution of thaumarchaeotal metabolism under contrasting oxygen conditions’
  • NERC Directed Grant (NE/K016342/1) (£261,000) (PI) (2016) ‘Biodiversity, ecosystem functions and policy across a tropical forest modification gradient’
  • 51cg / Elphinstone fund Postgraduate Scholarship (£126,840) (PI) (2016) ‘Ecological implications of drought on the activity and abundance of AOA and AOB’
  • Royal Society University Research Fellowship (UF150571) (£627,733) (PI) (2016) ‘Adaptation in Thaumarchaeota: the interplay between ecology and evolution’
  • NERC Standard grant (NE/L006286/1) (£488,224) (Co-I) (PI: James Prosser) (2014) ‘Soil ammonia oxidisers: an embarrassment of richness?’
  • 51cg Postgraduate Scholarship (£80,000) (PI) (2013) ‘Ecological insights into unexplored archaea through single-cell genomics and cultivation’
  • Early career NERC Independent Fellowship (NE/J019151/1) (£246,691) (PI) (2012) ‘Evolutionary adaptation in Archaea’
  • NERC Biomolecular Analysis Facility Application (2013): “Phylogenetic resolution and coherence in thaumarchaea”.  
  • NERC Biomolecular Analysis Facility Application (2013): “Evolutionary adaptation in archaea- community sequencing”.  
  • MRT (French Research Ministry) Postgraduate Scholarship (2005-2008)
  • European ERASMUS Traineeship Grant (2004)
  • ESA (European Space Agency) Traineeship Grant (2003)
Teaching

Teaching Responsibilities

Current Supervision

3 PhD students, 1 MSc student.

Teaching

Course co-coordinator:

  • Meet the scientists

Lectures at undergraduate level:

  • Ocean Biology
  • Diversity of life 
Publications

Page 1 of 1 Results 1 to 67 of 67

  • Soil-plastisphere interfacial properties enable decoding microplastics behaviour in the environment

    Sepehrnia, N., Azimzadeh, B., Charlton, L., Barrio-Zhang, H., Hallett, P. D., Gubry-Rangin, C., Tanino, Y., McHale, G., Martínez, C. E.
    Communications Earth & Environment
    Contributions to Journals: Articles
    • [ONLINE] DOI:

  • Evidence of Biological Nitrification Inhibition in barley to support sustainable nitrogen management

    Gubry-Rangin, C.
    Sustainable Microbiology
    Contributions to Journals: Articles
    • [ONLINE] DOI:

  • Structurally diverse biological nitrification inhibitors display distinct modes of inhibition in ammonia-oxidizing bacteria

    Kaur-Bhambra, J., Khatri, P. K., Hama, J., Gubry-Rangin, C., Brandt, K. K.
    FEMS Microbiology Ecology, vol. 102, no. 4, fiag032
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • High-quality genome assembly and linkage map for a rapidly evolving plant species: Silene uniflora is potentially suitable

    Osborne, O. G., Wood, D. P., Dobreva, M. P., Dunning, L. T., Tucker, R., Coates, S. E. R., Pellicer, J., Holmberg, J., Algar, A. C., Bocedi, G., Gubry-Rangin, C., Herrera Alsina, L., Juliandi, B., Lancaster, L., Touzet, P., Travis, J., Papadopulos, A.
    G3: Genes, Genomes, Genetics Mission, vol. 16, no. 3, jkag002
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Assessing the impact of nature-based solutions on soil health in sub-Saharan Africa through farmer-centred methods

    Bittner, D., Smith, J., Leontidis, G., Campbell, G. A., Biegel, J., Smith, P., Kuhnert, M., Skalský, R., Giuliani, L. M., Salik, A. W., Hallett, P., Burslem, D. F. R. P., Yakob, G., Mekuria, W., Phimister, E., Haileslassie, A., Tegegne, D., Norouzi, S., Chen, H., Gubry-Rangin, C., Khan, A.
    Environmental Research Letters, vol. 21, no. 4, 043004
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Pollination ecology in the tropical Andes: moving towards a cross-scale approach

    Rueda Uribe, C., Chautá, A., Woodman, T. L., Lasso, E., Pelayo, R. C., Manrique-Garzon, L. M., Muñoz, M. C., Allgayer, R., Ashman, T. L., Bocedi, G., Burslem, D., Camargo-Martínez, P. A., Echeverry-Galvis, M. ?., González-Arango, C., Gubry-Rangin, C., Lancaster, L., Layton, K., Manfredini, F., Martel, C., Montti, L., Papadopulos, A. S., Raguso, R. A., Ready, J., Rico-Guevara, A., Rocabado-Peñanco, C. G., Travis, J.
    Biological Reviews, vol. 100, no. 6, pp. 2312-2345
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Interactions of r/K-strategist bacteria and bacterivorous nematodes regulate herbivorous nematodes abundances under organic and inorganic fertilization practices

    Zheng, W., Fan, X., Gubry-Rangin, C., Chen, H., Zhang, L., Wu, C., Yin, C., Peng, H., Ma, Q., Liang, Y.
    Soil Ecology Letters, vol. 7, 250343
    Contributions to Journals: Articles
    • [ONLINE] DOI:

  • Feasibility and limitations of using specific nitrification inhibitors to differentiate ammonia oxidizer activity

    Tan, C., Zeng, Y., Gubry-Rangin, C., Yin, C., Liang, Y.
    Soil Biology and Biochemistry, vol. 208, 109848
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [ONLINE]

  • Genomic recovery from rare terrestrial microbes enabled by DNA-based GC-fractionation

    Sheridan, P. O., Meng, Y., Bodington, D., Coutts, D., Williams, T. A., Gubry-Rangin, C.
    ISME Communications, vol. 5, no. 1, ycaf152
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Organic fertilizer significantly mitigates N2O emissions while increase contributed of comammox Nitrospira in paddy soils

    Sun, H., Li, Y., Xing, Y., Bodington, D., Huang, X., Ding, C., Ge, T., Di, H., Xu, J., Gubry-Rangin, C., Li, Y.
    Science of the Total Environment, The, vol. 954, 176578
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Biological Nitrification Inhibitors with Antagonistic and Synergistic Effects on Growth of Ammonia Oxidisers and Soil Nitrification

    Issifu, S., Acharya, P., Bhambra, J. K., Gubry-Rangin, C., Rasche, F.
    Microbial Ecology, vol. 87, 143
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Land use effects on soil microbiome composition and traits with consequences for soil carbon cycling

    Cole, L., Goodall, T., Jehmlich, N., Griffiths, R. I., Gleixner, G., Gubry-Rangin, C., Malik, A.
    ISME Communications, vol. 4, no. 1, ycae116
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Metabolome fingerprinting reveals the presence of multiple nitrification inhibitors in biomass and root exudates of Thinopyrum intermedium

    Issifu, S., Acharya, P., Schöne, J., Bhambra, J. K., Gubry-Rangin, C., Rasche, F.
    Plant-Environment Interactions, vol. 5, no. 5, e70012
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Niche breadth specialisation impacts ecological and evolutionary adaptation following environmental change

    Gubry-Rangin, C., Aigle, A., Herrera Alsina, L., Lancaster, L., Prosser, J.
    The ISME Journal, vol. 18, no. 1, wrae183
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]
    • [OPEN ACCESS]

  • Nitrosotalea devaniterrae gen. nov., sp. nov., and Nitrosotalea sinensis sp. nov., two acidophilic ammonia oxidising archaea isolated from acidic soil, and proposal of the new order Nitrosotaleales ord. nov. within the class Nitrososphaeria of the phylum Nitrososphaerota

    Lehtovirta-Morley, L. E., Ge, C., Ross, J., Yao, H., Hazard, C., Gubry-Rangin, C., Prosser, J., Nicol, G.
    International Journal of Systematic and Evolutionary Microbiology, vol. 74, no. 9
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Accounting for extinction dynamics unifies the geological and biological histories of Indo-Australian Archipelago

    Herrera Alsina, L., Lancaster, L., Algar, A., Papadopulos, A., Iskandar, D. T., Bocedi, G., Creer, S., Villegas-Patraca, R., Fahri, F., Gubry-Rangin, C., Lupiyaningdyah, P., Mynard, P., Nangoy, M., Osborne, O. G., Sudiana, I. M., Juliandi, B., Burslem, D., Travis, J.
    Proceedings of the Royal Society B: Biological Sciences, vol. 291, no. 2031, 20240966
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]
    • [ONLINE]

  • Microplastics alter soil structural stability as quantified by high-energy moisture characteristics

    Sepehrnia, N., Gubry-Rangin, C., Tanino, Y., Hallett, P.
    Journal of Hazardous Materials, vol. 476, 134940
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Phylogenetic reconciliation: making the most of genomes to understand microbial ecology and evolution

    Williams, T. A., Davin, A. A., Szánthó, L. L., Stamatakis, A., Wahl, N. A., Woodcroft, B. J., Soo, R. M., Eme, L., Sheridan, P. O., Gubry-Rangin, C., Spang, A., Hugenholtz, P., Szöllősi, G. J.
    The ISME Journal, vol. 18, no. 1, wrae129
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Deciphering the functional importance of comammox vs. canonical ammonia oxidisers in nitrification and N2O emissions in acidic agricultural soils

    Tan, C., Yin, C., Zhang, L., Zeng, Y., Gubry-Rangin, C., Chen, H., Gao, Z., Peng, H., Li, T., Liang, Y.
    Soil Biology and Biochemistry, vol. 193, 109415
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • AOB Nitrosospira cluster 3a.2 (D11) dominates N2O emissions in fertilised agricultural soils.

    Deng, N., Gubry-Rangin, C., Song, X., Ju, X., Liu, S., Shen, J. P., Di, H., Han, L., Zhang, L.
    Journal of Environmental Management, vol. 355, 120504
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]
    • [ONLINE]

  • Genomics of soil depth niche partitioning in the Thaumarchaeota family Gagatemarchaeaceae

    Sheridan, P. O., Meng, Y., Williams, T. A., Gubry-Rangin, C.
    Nature Communications, vol. 14, 7305
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Impact of Phylogenetic Tree Completeness and Misspecification of Sampling Fractions on Trait Dependent Diversification Models

    Mynard, P., Algar, A. C., Lancaster, L., Bocedi, G., Fahri, F., Gubry-Rangin, C., Lupiyaningdyah, P., Nangoy, M., Osborne, O. G., Papadopulos, A., Sudiana, I. M., Juliandi, B., Travis, J., Herrera Alsina, L.
    Systematic Biology, vol. 72, no. 1, pp. 106-119
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • The missing link in biogeographic reconstruction: Accounting for lineage extinction rewrites history

    Herrera Alsina, L., Algar, A. C., Lancaster, L., Ornelas, J. F., Bocedi, G., Papadopulos, A. S., Gubry-Rangin, C., Osborne, O. G., Mynard, P., Sudiana, I. M., Lupiyaningdyah, P., Juliandi, B., Travis, J.
    Journal of Biogeography, vol. 49, no. 11, pp. 1941-1951
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Reconstruction of State-Dependent Diversification: Integrating Phenotypic Traits into Molecular Phylogenies

    Herrera Alsina, L., Mynard, P., Sudiana, I. M., Juliandi, B., Travis, J., Gubry-Rangin, C.
    Environmental Microbial Evolution: Methods and Protocols. Luo, H. (ed.). 1 edition. Springer, pp. 305-326, 22 pages
    Chapters in Books, Reports and Conference Proceedings: Chapters
    • [ONLINE] DOI:

  • Rooting species trees using gene tree-species tree reconciliation

    Brogan, J. H., Sheridan, P., Davín, A. A., Gubry-Rangin, C., Szöllősi, G. J., Williams, T. A.
    Environmental Microbial Evolution. Luo, H. (ed.). 1 edition. Humana Press, pp. 189-212, 34 pages
    Chapters in Books, Reports and Conference Proceedings: Chapters
    • [ONLINE] DOI:
    • [ONLINE]

  • Recovery of Lutacidiplasmatales archaeal order genomes suggests convergent evolution in Thermoplasmatota

    Sheridan, P., Meng, Y., Williams, T. A., Gubry-Rangin, C.
    Nature Communications, vol. 13, 4110
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Fauxcurrence: simulating multi-species occurrences for null models in species distribution modelling and biogeography

    Osborne, O., Fell, H., Atkins, H., Vantol, J., Phillips, D., Herrera Alsina, L., Mynard, P., Bocedi, G., Gubry-Rangin, C., Lancaster, L., Creer, S., Nangoy, M., Travis, J., Papadopulos, A., Algar, A. C., Fahri, F., Lupiyaningdyah, P., Sudiana, I. M., Juliandi, B.
    Ecography, vol. 2022, no. 7, e05880
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Foreword

    Subbarao, G. V., Lata, J., Gubry-Rangin, C., Nannipieri, P., Schlesinger, W. H.
    Biology and Fertility of Soils, vol. 58, pp. 193-194
    Contributions to Journals: Editorials
    • [ONLINE] DOI:

  • Chronic environmental perturbation influences microbial community assembly patterns

    Potts, L. D., Douglas, A., Perez Calderon, L. J., Witte, U., Prosser, J., Gubry-Rangin, C.
    Environmental Science & Technology, vol. 56, no. 4, pp. 2300-2311
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]
    • [ONLINE]

  • Long-Term Adaptation of Acidophilic Archaeal Ammonia Oxidisers Following Different Soil Fertilisation Histories

    Zhao, J., Wang, B., Zhou, X., Saiful Alam, M., Fan, J., Guo, Z., Zhang, H., Gubry-Rangin, C., Jia, Z.
    Microbial Ecology, vol. 83, pp. 424-435
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Revisiting plant biological nitrification inhibition efficiency using multiple archaeal and bacterial ammonia-oxidising cultures

    Bhambra, J. K., Wardak, D. L. R., Prosser, J. I., Gubry-Rangin, C.
    Biology and Fertility of Soils, vol. 58, pp. 241-249
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Grazing weakens putative competitions between active methanotrophs and nitrifiers modulating greenhouse-gas emissions in grassland soils

    Pan, H., Feng, H., Liu, Y., Lai, C., Zhuge, Y., Zhang, Q., Tang, C., Di, H., Jia, Z., Gubry-Rangin, C., Li, Y., Xu, J.
    ISME Communications, vol. 1, 74
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Preferential temperature and ammonia concentration for in-situ growth of Candidatus Nіtrоѕосоѕmісuѕ ammonia oxidising archaea

    Bello, M. O., Aigle, A., Meng, Y., Prosser, J. I., Gubry-Rangin, C.
    Soil Biology and Biochemistry, vol. 162, 108405
    Contributions to Journals: Articles
    • [ONLINE] DOI:
    • [OPEN ACCESS]

  • Ancient geological dynamics impact neutral biodiversity accumulation and are detectable in phylogenetic reconstructions

    Herrera Alsina, L., Algar, A. C., Bocedi, G., Gubry-Rangin, C., Lancaster, L., Mynard, P., Osborne, O., Papadopulos, A. S., Creer, S., Nangoy, M., Fahri, F., Lupiyaningdyah, P., Sudiana, I. M., Juliandi, B., Travis, J.
    Global Ecology and Biogeography, vol. 38, no. 8, pp. 1633–1642
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  • Gene duplication drives genome expansion in a major lineage of Thaumarchaeota

    Sheridan, P., Raguideau, S., Quince, C., Holden, J., Zhang, L., Thames Consortium, Williams, T. A., Gubry-Rangin, C.
    Nature Communications, vol. 11, 5494
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  • Experimental testing of hypotheses for temperature- and pH-based niche specialization of ammonia oxidizing archaea and bacteria

    Aigle, A., Gubry-Rangin, C., Thion, C., Estera-Molina, K., Richmond, H., Pett-Ridge, J., Firestone, M. K., Nicol, G., Prosser, J.
    Environmental Microbiology, vol. 22, no. 9, pp. 4032-4045
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  • Oxygen preference of deeply-rooted mesophilic thaumarchaeota in forest soil

    Biggs-Weber, E., Aigle, A., Prosser, J. I., Gubry-Rangin, C.
    Soil Biology and Biochemistry, vol. 148, 107848
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  • Differential Ecosystem Function Stability of Ammonia-Oxidizing Archaea and Bacteria following Short-Term Environmental Perturbation

    Zhao, J., Meng, Y., Drewer, J., Skiba, U. M., Prosser, J. I., Gubry-Rangin, C.
    mSystems, vol. 5, no. 3, pp. 1-14
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  • Selective inhibition of ammonia oxidising archaea by simvastatin stimulates growth of ammonia oxidising bacteria

    Zhao, J., Bello, M. O., Meng, Y., Prosser, J. I., Gubry-Rangin, C.
    Soil Biology and Biochemistry, vol. 141, 107673
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  • Linking Nitrous Oxide and Nitric Oxide Fluxes to Microbial Communities in Tropical Forest Soils and Oil Palm Plantations in Malaysia in Laboratory Incubations

    Drewer, J., Zhao, J., Leduning, M. M., Levy, P. E., Sentian, J., Gubry-Rangin, C., Skiba, U. M.
    Frontiers in Forests and Global Change, vol. 3, 4
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  • Nitrous oxide production by ammonia oxidizers: Physiological diversity, niche differentiation and potential mitigation strategies

    Prosser, J. I., Hink, L., Gubry-Rangin, C., Nicol, G. W.
    Global Change Biology, vol. 26, no. 1, pp. 103-118
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  • The application of high-throughput sequencing technology to analysis of amoA phylogeny and environmental niche specialisation of terrestrial bacterial ammonia-oxidisers

    Aigle, A., Prosser, J. I., Gubry-Rangin, C.
    Environmental Microbiome, vol. 14, 3
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  • Genome Sequence of “Candidatus Nitrosocosmicus franklandus” C13, a Terrestrial Ammonia-Oxidizing Archaeon

    Nicol, G. W., Hink, L., Gubry-Rangin, C., Prosser, J. I., Lehtovirta-Morley, L. E.
    Microbiology Resource Announcements, vol. 8, no. 40, e00435-19
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  • Characterisation of microbial communities of drill cuttings piles from offshore oil and gas installations

    Potts, L. D., Perez Calderon, L. J., Gubry-Rangin, C., Witte, U., Anderson, J. A.
    Marine Pollution Bulletin, vol. 142, pp. 169-177
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  • Differential sensitivity of ammonia oxidising archaea and bacteria to matric and osmotic potential

    Bello, M. O., Thion, C., Gubry-Rangin, C., Prosser, J. I.
    Soil Biology and Biochemistry, vol. 129, pp. 184-190
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  • Approaches to understanding the ecology and evolution of understudied terrestrial archaeal ammonia-oxidisers

    Gubry-Rangin, C., Williams, W., Prosser, J. I.
    Emerging Topics in Life Sciences , vol. 2, no. 4, pp. 619-328
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  • Effect of spatial origin and hydrocarbon composition on bacterial consortia community structure and hydrocarbon biodegradation rates

    Potts, L. D., Calderon, L. J. P., Gontikaki, E., Keith, L., Gubry-Rangin, C., Anderson, J. A., Witte, U.
    FEMS Microbiology Ecology, vol. 94, no. 9, pp. fiy127-fiy127
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  • Bacterial Community Response in Deep Faroe-Shetland Channel Sediments Following Hydrocarbon Entrainment With and Without Dispersant Addition

    Perez Calderon, L. J., Potts, L. D., Gontikaki, E., Gubry-Rangin, C., Cornulier, T., Gallego, A., Anderson, J. A., Witte, U. F.
    Frontiers in Marine Science: Deep-Sea Environments and Ecology, vol. 5, pp. 1-17
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  • The consequences of niche and physiological differentiation of archaeal and bacterial ammonia oxidisers for nitrous oxide emissions

    Hink, L., Gubry-Rangin, C., Nicol, G. W., Prosser, J. I.
    The ISME Journal, vol. 12, pp. 1084-1093
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  • Ammonia-oxidising archaea living at low pH: Insights from comparative genomics

    Herbold, C. W., Lehtovirta-Morley, L. E., Jung, M., Jehmlich, N., Hausmann, B., Han, P., Loy, A., Pester, M., Sayavedra-Soto, L. A., Rhee, S., Prosser, J. I., Nicol, G. W., Wagner, M., Gubry-Rangin, C.
    Environmental Microbiology, vol. 19, no. 12, pp. 4939-4952
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  • Kinetics of NH3-oxidation, NO-turnover, N2O-production and electron flow during oxygen depletion in model bacterial and archaeal ammonia oxidisers

    Hink, L., Lycus, P., Gubry-Rangin, C., Frostegård, ?., Nicol, G. W., Prosser, J. I., Bakken, L. R.
    Environmental Microbiology, vol. 19, no. 12, pp. 4882-4896
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  • Temperature responses of soil ammonia-oxidising archaea depend on pH

    Gubry-Rangin, C., Novotnik, B., Mandič-Mulec, I., Nicol, G. W., Prosser, J. I.
    Soil Biology and Biochemistry, vol. 106, pp. 61-68
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  • Pseudomonas fluorescens C7R12 type III secretion system impacts mycorrhization of Medicago truncatula and associated microbial communities

    Viollet, A., Pivato, B., Mougel, C., Cleyet-Marel, J., Gubry-Rangin, C., Lemanceau, P., Mazurier, S.
    Mycorrhiza, vol. 27, no. 1, pp. 23-33
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  • Seqenv: linking sequences to environments through text mining

    Sinclair, L., Ijaz, U. Z., Jensen, L. J., Coolen, M. J. L., Gubry-Rangin, C., Chronakova, A., Oulas, A., Pavloudi, C., Schnetzer, J., Weimann, A., Ijaz, A., Eiler, A., Quince, C., Pafilis, E.
    PeerJ, vol. 4, 2690
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  • Isolation of 'Candidatus Nitrosocosmicus franklandus', a novel ureolytic soil archaeal ammonia oxidiser with tolerance to high ammonia concentration

    Lehtovirta-Morley, L. E., Ross, J., Hink, L., Weber, E. B., Gubry-Rangin, C., Thion, C., Prosser, J. I., Nicol, G. W.
    FEMS Microbiology Ecology, vol. 92, no. 5, pp. 1-10
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  • Molecular adaptation of Ammonia Monooxygenase during independent pH specialization in Thaumarchaeota

    Macqueen, D. J., Gubry-Rangin, C.
    Molecular Ecology, vol. 25, no. 9, pp. 1986-1999
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  • Phylogenetic congruence and ecological coherence in terrestrial Thaumarchaeota

    Oton, E. V., Quince, C., Nicol, G. W., Prosser, J. I., Gubry-Rangin, C.
    The ISME Journal, vol. 10, no. 1, pp. 85-96
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  • Coupling of diversification and pH adaptation during the evolution of terrestrial Thaumarchaeota

    Gubry-Rangin, C., Kratsch, C., Williams, T. A., McHardy, A. C., Embley, T. M., Prosser, J. I., MacQueen, D. J.
    PNAS, vol. 112, no. 30, pp. 9370-9375
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  • pH as a Driver for Ammonia-Oxidizing Archaea in Forest Soils

    Stempfhuber, B., Engel, M., Fischer, D., Neskovic-Prit, G., Wubet, T., Schöning, I., Gubry-Rangin, C., Kublik, S., Schloter-Hai, B., Rattei, T., Welzl, G., Nicol, G. W., Schrumpf, M., Buscot, F., Prosser, J. I., Schloter, M.
    Microbial Ecology, vol. 69, no. 4, pp. 879-883
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  • Ammonia oxidation is not required for growth of Group 1.1c soil Thaumarchaeota

    Weber, E. B., Lehtovirta-Morley, L. E., Prosser, J. I., Gubry-Rangin, C.
    FEMS Microbiology Ecology, vol. 91, no. 3, fiv001
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  • Definition and evolution of a new symbiovar, sv. rigiduloides, among Ensifer meliloti efficiently nodulating Medicago species

    Gubry-Rangin, C., Béna, G., Cleyet-Marel, J., Brunel, B.
    Systematic and Applied Microbiology, vol. 36, no. 7, pp. 490-496
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  • Niche specialization of terrestrial archaeal ammonia oxidizers

    Gubry-Rangin, C., Hai, B., Quince, C., Engel, M., Thomson, B. C., James, P., Schloter, M., Griffiths, R. I., Prosser, J. I., Nicol, G. W.
    PNAS, vol. 108, no. 52, pp. 21206-21211
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  • Archaea rather than bacteria control nitrification in two agricultural acidic soils

    Gubry-Rangin, C., Nicol, G. W., Prosser, J. I.
    FEMS Microbiology Ecology, vol. 74, no. 3, pp. 566-574
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  • Thaumarchaeal ammonia oxidation in an acidic forest peat soil is not influenced by ammonium amendment

    Stopnisek, N., Gubry-Rangin, C., Höfferle, S., Nicol, G. W., Mandic-Mulec, I., Prosser, J. I.
    Applied and Environmental Microbiology, vol. 76, no. 22, pp. 7626-7634
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  • Partner choice in Medicago truncatula-Sinorhizobium symbiosis

    Gubry-Rangin, C., Garcia, M., Béna, G.
    Proceedings of the Royal Society of London. B, Biological Sciences, vol. 277, no. 1690, pp. 1947-1951
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  • Effects of Medicago truncatula genetic diversity, rhizobial competition, and strain effectiveness on the diversity of a natural sinorhizobium species community

    Gubry-Rangin, C., Brunel, B., Cleyet-Marel, J., Perrineau, M., Béna, G.
    Applied and Environmental Microbiology, vol. 74, no. 18, pp. 5653-5661
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  • In situ molecular detection of some white-rot and brown-rot basidiomycetes infecting temperate and tropical woods

    Zaremski, A., Duccousso, M., Domergue, O., Fardoux, J., Rangin, C., Fouquet, D., Joly, H., Sales, C., Dreyfus, B., Prin, Y.
    Canadian journal of forest research = Revue canadienne de recherche forestiere, vol. 35, pp. 1256-1260
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