51cg

Professor Hai Deng

Professor Hai Deng
Professor Hai Deng
Professor Hai Deng

Personal Chair

51cg
Email Address
h.deng@abdn.ac.uk
Telephone Number
+44 (0)1224 272953
Office Address
038 Meston Building
Old Aberdeen Campus
Meston Walk
AB24 3UE

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School/Department
School of Natural and Computing Sciences


Biography

08/2022 -                 Personal Chair, 51cg, UK

08/2018 - 07/2022   Reader, 51cg, UK

08/2014 - 07/2018  Senior Lecturer, 51cg, UK

10/2008 - 07/2014   Lecturer, 51cg, UK 

06/2002 - 09/2008   Postdoctoral fellow, University of St Andrews, UK 

1999 - 2002             Ph.D.   University of Wales Swansea, UK 

 

Memberships and Affiliations

Internal Memberships

Director of Research

PGR coordinator

CM2514 course coordinator

External Memberships

BBSRC pool of expert

MRC and BBSRC panel members

UKRI FLF peer review colleague

External reviewer for a series of peer-reviewed journals within my area of interest, including Nature, Nat. Chen. ACIE, Sci. Adv. Chem. Sci., Chem Comm., ACS Chem. Biol., ChemBioChem, Marine Biotechnology, Org & Biomol. Chem, FEMS Microbiology Ecology, Chemistry today, Marine Drugs, Fish and Shellfish Immunology, and Virulence.

A reviewer of research councils, BBSRC (UK) and FCT (Fundação para a Ciência e a Tecnologia in the field of Chemistry and Biochemistry, 2010-2011), Fonds de recherche du Québec - Nature et technologies, Québec, Canada (2015-2016) and charities, Leverhulme Trust (UK).

Research

Research Overview

My research carries on the great tradition of UK natural product biosynthesis activity. We have  all the required skills to succeed in such an enterprise, involving discovery of new families of specialised metabolites, bacterial genomics, chemical synthesis and the associated molecular biology to manipulate genomes to enzymology and the reconstruction of biochemistry. All of this is focussed on understanding the molecular basis and mechanism of natural products assembly.

Recent contributions involve the understanding of a group of unsaturated amino acids called dehydroamino acids (dhAAs). dhAAs are key components in many peptidyl therapeutics and versatile building blocks in peptide chemistry where organic chemists generate peptidyl derivatives through Michael additions, cross couplings and cycloaddition. They are used as bio-orthogonal handles for later stage modification of biomolecules. However, accessing dhAAs in structurally complex molecules presents a synthetic challenge, often resulting in poor atomic economy.

Among approximately 40 dhAAs found in the natural product inventory, only two, dehydroalanine (Dha) and (Z)-dehydrobutyrine (ZDhb), are well-studied. In this context our lab has elucidated the formation of several understudied dhAAs in newly discovered bacterial peptide-related metabolites, such as pyrrolizidine alkaloids (PAs) (Angew Chem. Int. Ed. 2015, 54, 12697, Nat. Comm. 2022, 13, 62), short dehydrated non-ribosomal peptides (Angew Chemie. Int. Ed. 2021, 60, 3229) and a new family of ribosomally synthesized and posttranslationally modified peptides (RiPPs) (Nat. Comm. 2022, 13, 5044) as shown below. Apart from this, we have also accumulated an outstanding body of work from bioactive natural product discovery to new enzymology as evidenced in our publication profile.

The discovery we made offers an alternative to rational engineering of pathways to generate bioactive peptides. As such we have obtained grants from various funding bodies (i.e. UKRI, Leverhulm Trust, Royal Society, Royal Society of Edinburgh, IBIOIC, EC) to further investigate potential applications of novel enzymes identified in these pathways towards the development of pharmaceuticals. 

rep papers 2023.jpg

Research Areas

Biological and Environmental Sciences

Research Specialisms

  • Industrial Biotechnology
  • Biochemistry
  • Organic Chemistry
  • Applied Chemistry

Our research specialisms are based on the Higher Education Classification of Subjects (HECoS) which is , published under the licence.

Past Research

My team has accumulated a good body of work on bioactive natural product discovery (from polyketides and peptides to alkaloids)  and their biosynthesis, and new enzyme investigation as shown below. Collectively it is a combination of both its range and illustration and  these new organic molecules and new enzymes my team has discovered will find applications for the development of pharmaceuticals and agrochemicals or new ways to biosciences.

All specialised metabolites 2023.jpg

Collaborations

Professor Mathew Jenner, Department of Chemistry, University of Warwick, UK

Professor Steven Cobb, Department of Chemistry, University of Durham, UK

Dr Jioji Tabudravu, School of Natural Sciences, University of Central Lancashire, UK

Dr David Clarke, EastChem, School of Chemistry, University of Edinburgh, Edinburgh, EH9 3FJ, UK

Professor Bruce Milne, Department of Physics, University of Coimbra, Rua Larga, 3004-516, Coimbra, Portugal

Professor Yi Yu, School of Pharmaceutical Sciences, Wuhan University, Wuhan 430071, China

Professor Kwaku Kyeremeh, Department of Chemistry, University of Ghana, Ghana

NCIMB Ltd and Ingenza Ltd

Funding and Grants

We gratefully thank the funding bodies below for financial supports of our research

MRC, BBSRC, Leverhulm Trust, EC, IBIOIC, The Royal Society and The Royal Society of Edinburgh.

Funding bodies.png

 

 

 

Teaching

Teaching Responsibilities

CM4518 Biological origin of natural products

CM1020 Chemistry for Biosciences 1

CM1512 Chemistry for Biosciences 2

CM3534 Organic and Biological Chemistry

 

Publications

Page 1 of 3 Results 1 to 50 of 110

  • Evolution, structure and function of the biosynthetic gene cluster of myriocin, a potent inhibitory sphingolipid

    Brand, A., Rutter, B., Herrera, M., Perez-Ortiz, G., Greco, C., Ashley, B., Deng, H., Hay, A., Bedford, C., Wenzel, M., Mondo, S., Konkel, Z., Slot, J., Farrer, R., Campopiano, D.
    Working Papers: Preprint Papers
  • N-Salicyl-amino acid derivatives with antiparasitic activity from Pseudomonas sp. UIAU-6B

    Rajakulendran, J. E., Oluwabusola, E. T., Cerone, M., Smith, T. K., Adebisi, O. O., Adedotun, A., Preet, G., Soldatou, S., Deng, H., Ebel, R., Jaspars, M.
    Beilstein journal of organic chemistry, vol. 21, pp. 1388-1396
    Contributions to Journals: Articles
  • Biosynthesis of a N-Acetylated Tricyclic Carbazole with Antithrombotic Activity

    Luo, J., Shen, Y., Liu, K., Hong, L., Yang, M., Li, N., Deng, H., Lin, H. W., Zhou, Y.
    Journal of Natural Products, vol. 88, no. 5, pp. 1172–1180
    Contributions to Journals: Articles
  • Isolation and Bioactivity of Natural Products from Streptomyces sp. MA37

    Maglangit, F., Fang, Q., Tabudravu, J. N., Kyeremeh, K., Jaspars, M., Deng, H.
    Molecules, vol. 30, no. 2, 306
    Contributions to Journals: Articles
  • Halogenated Adenine and Adenosine Natural Products in Streptomyces sp. JCM9888

    Chen, Y., Lowe, P. T., Deng, H., O'Hagan, D.
    European Journal of Organic Chemistry, vol. 27, no. 43, e202400578
    Contributions to Journals: Articles
  • Characterization of the Baeyer-Villiger monooxygenase in the pathway of the bacterial pyrrolizidine alkaloids, legonmycins

    Wang, S., Maglangit, F., Fang, Q., Kyeremeh, K., Deng, H.
    RSC Chemical Biology, vol. 5, no. 11, pp. 1177-85
    Contributions to Journals: Articles
  • Accraspiroketides A-B, Phenylnaphthacenoid-Derived Polyketides with Unprecedented [6+6+6+6]+[5+5] Spiro-Architecture

    Maglangit, F., Wang, S., Moser, A., Kyeremeh, K., Trembleau, L., Zhou, Y., Clark, D. J., Tabudravu, J., Deng, H.
    Journal of Natural Products, vol. 87, no. 4, pp. 831-836
    Contributions to Journals: Articles
  • Mutagenetic analysis of the biosynthetic pathway of tetramate bripiodionen bearing 3-(2H-pyran-2-ylidene)pyrrolidine-2,4-dione skeleton

    Zang, H., Cheng, Y., Li, M., Zhou, L., Hong, L. L., Deng, H., Lin, H. W., Zhou, Y.
    Microbial Cell Factories, vol. 23, 87
    Contributions to Journals: Articles
  • New Antimicrobial Accramycins from Streptomyces sp. MA37 Variant

    Alabed, A., Kyeremeh, K., Deng, H.
    MolBank, vol. 2024, no. 1, M1754
    Contributions to Journals: Articles
  • Dehydroamino acid residues in bioactive natural products

    Wang, S., Wu, K., Tang, Y., Deng, H.
    Natural Product Reports, vol. 41, no. 2, pp. 273-297
    Contributions to Journals: Review articles
  • Chemo-Enzymatic Synthesis of Bioactive Carbazole Derivatives

    Alrashdi, S. A. M., Casolari, F., Kyeremeh, K., Deng, H.
    SynBio, vol. 2, no. 1, pp. 21-30
    Contributions to Journals: Articles
  • Size matters

    Su, L., Deng, H.
    Nature Chemical Biology, vol. 20, pp. 8-10
    Contributions to Journals: Comments and Debates
  • Preparation, assay, and application of 4-fluorothreonine transaldolase from Streptomyces sp. MA37 for β-hydroxyl amino acid derivatives

    Maglangit, F., Deng, H.
    Methods in Enzymology: Fluorine Metabolism, Transport and Enzymatic Chemistry. Stockbridge, R. B. (ed.). 696 edition. Elsevier, pp. 179-199, 21 pages
    Chapters in Books, Reports and Conference Proceedings: Chapters
  • 3'-O-β-Glucosyl-4',5'-didehydro-5'-deoxyadenosine Is a Natural Product of the Nucleocidin Producers Streptomyces virens and Streptomyces calvus.

    Feng, X., Zhang, Q., Clarke, D. J., Deng, H., O'Hagan, D.
    Journal of Natural Products, vol. 86, no. 10, pp. 2326-2332
    Contributions to Journals: Articles
  • Exploring a Streptomyces wax synthase using acyl-SNACs as donor substrates

    Casolari, F., Alrashdi, S., Carr, R., Deng, H.
    RSC Chemical Biology, vol. 4, no. 10, pp. 742-747
    Contributions to Journals: Articles
  • Biosynthesis of trialkyl-substituted aromatic polyketide NFAT-133 involves unusual P450 monooxygenase-mediating aromatization and a putative metallo-beta-lactamase fold hydrolase

    Yang, M., Li, W., Zhou, L., Lin, X., Zhang, W., Shen, Y., Deng, H., Lin, H., Zhou, Y.
    Synthetic and Systems Biotechnology, vol. 8, no. 3, pp. 349-356
    Contributions to Journals: Articles
  • Deletion of the accramycin pathway-specific regulatory gene accJ activates the production of unrelated polyketide metabolites

    Maglangit, F., Kyeremeh, K., Deng, H.
    Natural Product Research, vol. 37, no. 16, pp. 2753-2758
    Contributions to Journals: Articles
  • Identification of genes essential for fluorination and sulfamylation within the nucleocidin gene clusters of Streptomyces calvus and Streptomyces virens

    Wojnowska, M., Feng, X., Chen, Y., Deng, H., O'Hagan, D.
    ChemBioChem, vol. 24, no. 5, e202200684
    Contributions to Journals: Articles
  • Switching Prenyl Donor Specificities in Squalene Synthase-Like Aromatic Prenyltransferases from Bacterial Carbazole Alkaloid Biosynthesis

    Shen, Y., Zhang, L., Yang, M., Shi, T., Li, Y., Li, L., Yu, Y., Deng, H., Lin, H. W., Zhou, Y.
    ACS Chemical Biology, vol. 18, no. 1, pp. 123-133
    Contributions to Journals: Articles
  • Chemoenzymatic Synthesis of Indole-Containing Acyloin Derivatives

    Alrashdi, S., Casolari, F., Alabed, A., Kyeremeh, K., Deng, H.
    Molecules, vol. 28, 354
    Contributions to Journals: Articles
  • Digyalipopeptide A, an antiparasitic cyclic peptide from the Ghanaian Bacillus sp. strain DE2B.

    Nartey, A. P., Dofuor, A. K., Owusu, K. B. A., Camas, A. S., Deng, H., Jaspars, M., Kyeremeh, K.
    Beilstein journal of organic chemistry, vol. 18, pp. 1763-1771
    Contributions to Journals: Articles
  • A ribosomally synthesised and post-translationally modified peptide containing a β-enamino acid and a macrocyclic motif

    Wang, S., Lin, S., Fang, Q., Gyampoh, R., Lu, Z., Gao, Y., Clarke, D. J., Wu, K., Trembleau, L., Yu, Y., Kyeremeh, K., Milne, B. F., Tabudravu, J., Deng, H.
    Nature Communications, vol. 13, no. 1, 5044
    Contributions to Journals: Articles
  • A Second Near-Infrared Ru(II) Polypyridyl Complex for Synergistic Chemo-Photothermal Therapy

    Liu, Y., Li, Q., Gu, M., Lu, D., Xiong, X., Zhang, Z., Pan, Y., Liao, Y., Ding, Q., Gong, W., Chen, D. S., Guan, M., Wu, J., Tian, Z., Deng, H., Gu, L., Hong, X., Xiao, Y.
    Journal of Medicinal Chemistry, vol. 65, no. 3, pp. 2225-2237
    Contributions to Journals: Articles
  • Organic NIR-II dyes with ultralong circulation persistence for image-guided delivery and therapy

    Li, Y., Gao, J., Wang, S., Li, S., Hou, X., Pan, Y., Gao, J., Qiao, X., Tian, Z., Chen, D., Deng, H., Deng, Z., Hong, X., Xiao, Y.
    Journal of Controlled Release, vol. 342, pp. 157-169
    Contributions to Journals: Articles
  • Aminoacyl chain translocation catalysed by a type II thioesterase domain in an unusual non-ribosomal peptide synthetase

    Wang, S., Brittain, W. D., Zhang, Q., Lu, Z., Tong, M. H., Wu, K., Kyeremeh, K., Jenner, M., Yu, Y., Cobb, S. L., Deng, H.
    Nature Communications, vol. 13, no. 1, 62
    Contributions to Journals: Articles
  • Characterization of a class II ketol-acid reductoisomerase from Mycobacterium tuberculosis

    Valera, A., Wang, S., Carr, R., Trembleau, L., Deng, H.
    RSC Advances, vol. 12, no. 17, pp. 10540-10544
    Contributions to Journals: Articles
  • The chemical profile of activated secondary metabolites by overexpressing LaeA in Aspergillus niger

    Wang, B., Li, X., Tabudravu, J., Wang, S., Deng, H., Pan, L.
    Microbiological Research, vol. 248, 126735
    Contributions to Journals: Articles
  • Peculiarities of promiscuous l-threonine transaldolases for enantioselective synthesis of β-hydroxy-α-amino acids

    Deng, H., Wang, S.
    Applied Microbiology and Biotechnology, vol. 105, pp. 3507–3520
    Contributions to Journals: Articles
  • Bacterial Pathogens: Threat or Treat? (a review on bioactive natural products from bacterial pathogens)

    Maglangit, F., Yu, Y., Deng, H.
    Natural Product Reports, vol. 38, no. 4, pp. 782-821
    Contributions to Journals: Review articles
  • Genomic scanning enabling discovery of a new antibacterial bicyclic carbamate-containing alkaloid

    Fang, Q., Wu, L., Urwald, C., Mugat, M., Wang, S., Kyeremeh, K., Philips, C., Law, S., Zhou, Y., Deng, H.
    Synthetic and Systems Biotechnology, vol. 6, no. 1, pp. 12-19
    Contributions to Journals: Articles
  • Discovery and biosynthetic investigation of a new antibacterial dehydrated non‐ribosomal tripeptide

    Wang, S., Fang, Q., Lu, Z., Gao, Y., Trembleau, L., Ebel, R., Andersen, J. H., Philips, C., Law, S., Deng, H.
    Angewandte Chemie International Edition, vol. 60, no. 6, pp. 3229-3237
    Contributions to Journals: Articles
  • Upconversion NIR-II fluorophores for mitochondria-targeted cancer imaging and photothermal therapy

    Zhou, H., Zeng, X., Li, A., Zhou, W., Tang, L., Hu, W., Fan, Q., Meng, X., Deng, H., Duan, L., Li, Y., Deng, Z., Hong, X., Xiao, Y.
    Nature Communications, vol. 11, 6183
    Contributions to Journals: Articles
  • Discovery of New Antibacterial Accramycins from a Genetic Variant of the Soil Bacterium, Streptomyces sp. MA37

    Maglangit, F., Zhang, Y., Kyeremeh, K., Deng, H.
    Biomolecules, vol. 10, no. 10, pp. 1-11
    Contributions to Journals: Articles
  • Defluorination of 4-fluorothreonine by threonine deaminase

    Wu, L., Deng, H.
    Organic & Biomolecular Chemistry, vol. 18, no. 32, pp. 6236-6240
    Contributions to Journals: Articles
  • Identification of 5-Fluoro-5-Deoxy-Ribulose as a Shunt Fluorometabolite in Streptomyces sp. MA37

    Wu, L., Tong, M. H., Kyeremeh, K., Deng, H.
    Biomolecules, vol. 10, no. 7, 1023
    Contributions to Journals: Articles
  • Novel South African Rare Actinomycete Kribbellaspeibonae Strain SK5: A Prolific Producer of Hydroxamate Siderophores Including New Dehydroxylated Congeners

    Acquah, K. S., Beukes, D. R., Warner, D. F., Meyers, P. R., Sunassee, S. N., Maglangit, F., Deng, H., Jaspars, M., Gammon, D. W.
    Molecules, vol. 25, no. 13, 2979
    Contributions to Journals: Articles
  • An unusual metal-bound 4-fluorothreonine transaldolase from Streptomyces sp. MA37 catalyses promiscuous transaldol reactions

    Wu, L., Tong, M. H., Raab, A., Fang, Q., Wang, S., Kyeremeh, K., Yu, Y., Deng, H.
    Applied Microbiology and Biotechnology, vol. 104, pp. 3885-3896
    Contributions to Journals: Articles
  • Fluorine biocatalysis

    Wu, L., Maglangit, F., Deng, H.
    Current Opinion in Chemical Biology, vol. 55, pp. 119-126
    Contributions to Journals: Articles
  • Characterization of the promiscuous N-acyl CoA transferase, LgoC, in legonoxamine biosynthesis

    Maglangit, F., Alrashdi, S., Renault, J., Trembleau, L., Victoria, C., Tong, M. H., Wang, S., Kyeremeh, K., Deng, H.
    Organic & Biomolecular Chemistry, vol. 18, no. 12, pp. 2219-2222
    Contributions to Journals: Articles
  • Novel NIR-II organic fluorophores for bioimaging beyond 1550 nm

    Li, Y., Liu, Y., Li, Q., Tian, T., Zhou, W., Cui, Y., Wang, X., cheng, x., Ding, Q., Wang, X., Wu, J., Deng, H., Li, Y., Meng, X., Deng, Z., Hong, X., Xiao, Y.
    Chemical Science, vol. 11, no. 10, pp. 2621-2626
    Contributions to Journals: Articles
  • Targeted isolation of indole alkaloids from Streptomyces sp. CT37

    Fang, Q., Maglangit, F., Mugat, M., Urwald, C., Kyeremeh, K., Deng, H.
    Molecules, vol. 25, no. 5, 1108
    Contributions to Journals: Articles
  • The X-factor: enhanced β-oxidation on intracellular triacylglycerols enabling overproduction of polyketide drug-like molecules in microorganisms

    Wang, S., Deng, H.
    Synthetic and Systems Biotechnology, vol. 5, no. 1, pp. 19-20
    Contributions to Journals: Articles
  • Signalling and Bioactive Metabolites from Streptomyces sp. RK44

    Fang, Q., Maglangit, F., Wu, L., Ebel, R., Kyeremeh, K., Andersen, J. H., Annang, F., Perez de Nanclares, G., Reyes, F., Deng, H.
    Molecules, vol. 25, no. 3, 460
    Contributions to Journals: Articles
  • A Co-Culturing Approach Enables Discovery and Biosynthesis of a Bioactive Indole Alkaloid Metabolite

    Maglangit, F., Fang, Q., Kyeremeh, K., Sternberg, J. M., Ebel, R., Deng, H.
    Molecules, vol. 25, no. 2, 256
    Contributions to Journals: Articles
  • MS Dereplication for Rapid Discovery of Structurally New or Novel Natural Products

    Tabudravu, J., Pellissier, L., Smith, A. J., Kid, R., Milton, E. J., Deng, H., Ebel, R., Gissi, C., Milne, B. F., Cimpan, G., Jaspars, M.
    Marine Drugs, vol. 18, no. 40, pp. 56-57
    Contributions to Journals: Articles
  • Enzymatic Reconstitution and Biosynthetic Investigation of the Bacterial Carbazole Neocarazostatin A

    Liu, Y., Su, L., Fang, Q., Tabudravu, J., Yang, X., Rickaby, K., Trembleau, L., Kyeremeh, K., Deng, Z., Deng, H., Yu, Y.
    Journal of Organic Chemistry, vol. 84, no. 24, pp. 16323-16328
    Contributions to Journals: Articles
  • Paenidigyamycin g: 1-acetyl-2,4-dimethyl-3-phenethyl-1H-imidazol-3-ium

    Tetevi, G. M., Kwain, S., Mensah, T., Camas, A. S., Camas, M., Dofuor, A. K., Azerigyik, F. A., Oluwabusola, E., Deng, H., Jaspars, M., Kyeremeh, K.
    MolBank, vol. 2019, no. 4, M1094
    Contributions to Journals: Comments and Debates
  • Accramycin A, a New Aromatic Polyketide, from the Soil Bacterium, Streptomyces sp. MA37

    Maglangit, F., Fang, Q., Leman, V., Soldatou, S., Ebel, R., Kyeremeh, K., Deng, H.
    Molecules, vol. 24, no. 18, 3384
    Contributions to Journals: Articles
  • Digyaindoleacid A: 2-(1-(4-hydroxyphenyl)-3-oxobut-1-en-2-yloxy)-3-(1H-indol-3-yl)propanoic acid, a novel indole alkaloid

    Kwain, S., Tetevi, G. M., Mensah, T., Camas, A. S., Camas, M., Dofuor, A. K., Azerigyik, F. A., Deng, H., Jaspars, M., Kyeremeh, K.
    MolBank, vol. 2019, no. 3, M1080
    Contributions to Journals: Articles
  • Mn-Loaded apolactoferrin dots for in vivo MRI and NIR-II cancer imaging

    Zhou, H., Yang, H., Tang, L., Wang, Y., Li, Y., Liu, N., Zeng, X., Yan, Y., Wu, J., Chen, S., Xiao, L., Yu, Y., Deng, Z., Deng, H., Hong, X., Xiao, Y.
    Journal of Materials Chemistry A, vol. 7, no. 31, pp. 9448-9454
    Contributions to Journals: Articles
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